Detailed information of OS493_007887-T1 in Lophelia pertusa

Genomic Location: scaffold_18:248663...253676
NR annotation: KAJ7337734.1, hypothetical protein OS493_007887 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q60436Serrate RNA effector molecule homolog (Fragment) OS=Cricetulus griseus OX=10029 GN=SRRT PE=2 SV=3
Q6INH5Serrate RNA effector molecule homolog B OS=Xenopus laevis OX=8355 GN=srrt-b PE=2 SV=1
Q66I22Serrate RNA effector molecule homolog OS=Danio rerio OX=7955 GN=srrt PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002648 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04959
all species →		ARS2Arsenite-resistance protein 2FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039727
all species →		FamilySERRATE/Ars2Interproscan
IPR007042
all species →		DomainSERRATE/Ars2 , C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13165
all species →		ARSENITE-RESISTANCE PROTEIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006397
all species →		Biological ProcessmRNA processingInterproscan
GO:0016604
all species →		Cellular Componentnuclear bodyInterproscan
GO:0031053
all species →		Biological Processprimary miRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_007887-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_007887-T1 global co-expression network
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