Detailed information of OS493_007900-T1 in Lophelia pertusa

Genomic Location: scaffold_18:486118...503784
NR annotation: KAJ7337747.1, Disintegrin and metalloproteinase domain-containing protein 17 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P78536Disintegrin and metalloproteinase domain-containing protein 17 OS=Homo sapiens OX=9606 GN=ADAM17 PE=1 SV=1
Q9Z1K9Disintegrin and metalloproteinase domain-containing protein 17 OS=Rattus norvegicus OX=10116 GN=Adam17 PE=1 SV=1
Q9Z0F8Disintegrin and metalloproteinase domain-containing protein 17 OS=Mus musculus OX=10090 GN=Adam17 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000695 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16698
all species →		ADAM17_MPDMembrane-proximal domain, switch, for ADAM17DomainInterproscan
PF13574
all species →		Reprolysin_2Metallo-peptidase family M12B Reprolysin-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036436
all species →		Homologous_superfamilyDisintegrin domain superfamilyInterproscan
IPR032029
all species →		DomainADAM17, membrane-proximal domainInterproscan
IPR001762
all species →		DomainDisintegrin domainInterproscan
IPR024079
all species →		Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR051489
all species →		FamilyDisintegrin and Metalloproteinase Domain-ContainingInterproscan
IPR001590
all species →		DomainPeptidase M12B, ADAM/reprolysinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45702
all species →		ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008237
all species →		Molecular Functionmetallopeptidase activityInterproscan
GO:0004222
all species →		Molecular Functionmetalloendopeptidase activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0006509
all species →		Biological Processmembrane protein ectodomain proteolysisInterproscan
GO:0007219
all species →		Biological ProcessNotch signaling pathwayInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_007900-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_007900-T1 global co-expression network
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