Gene detail

Detailed information of OS493_008265-T1 in Lophelia pertusa

Genomic Location: scaffold_19:1990297...1998055
NR annotation: KAJ7393017.1, MAD2 mitotic arrest deficient-like 2 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9UI95	Mitotic spindle assembly checkpoint protein MAD2B OS=Homo sapiens OX=9606 GN=MAD2L2 PE=1 SV=2
Q2KIP7	Mitotic spindle assembly checkpoint protein MAD2B OS=Bos taurus OX=9913 GN=MAD2L2 PE=2 SV=1
Q4KWZ6	Mitotic spindle assembly checkpoint protein MAD2B OS=Gallus gallus OX=9031 GN=MAD2L2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005300 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02301 all species →	HORMA	HORMA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003511 all species →	Domain	HORMA domain	Interproscan
IPR045091 all species →	Family	Mad2-like	Interproscan
IPR036570 all species →	Homologous_superfamily	HORMA domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11842 all species →	MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016035 all species →	Cellular Component	zeta DNA polymerase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13728	MAD2L2; mitotic spindle assembly checkpoint protein MAD2B	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_008265-T1 global co-expression network