Detailed information of OS493_008378-T1 in Lophelia pertusa

Genomic Location: scaffold_19:3100746...3111175
NR annotation: KAJ7393080.1, F-BAR and double SH3 domains protein 2 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O94868F-BAR and double SH3 domains protein 2 OS=Homo sapiens OX=9606 GN=FCHSD2 PE=1 SV=3
Q3USJ8F-BAR and double SH3 domains protein 2 OS=Mus musculus OX=10090 GN=Fchsd2 PE=1 SV=2
X2JAU8Protein nervous wreck OS=Drosophila melanogaster OX=7227 GN=nwk PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005621 (this species only)
Ubiquitin familyUBD|Other|SH3 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14604
all species →		SH3_9Variant SH3 domainDomainInterproscan
PF00018
all species →		SH3_1SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035460
all species →		DomainFCHSD, SH3 domain 1Interproscan
IPR001452
all species →		DomainSH3 domainInterproscan
IPR036028
all species →		Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR027267
all species →		Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR031160
all species →		DomainF-BAR domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15735
all species →		FCH AND DOUBLE SH3 DOMAINS PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0007274
all species →		Biological Processneuromuscular synaptic transmissionInterproscan
GO:0030833
all species →		Biological Processregulation of actin filament polymerizationInterproscan
GO:0031594
all species →		Cellular Componentneuromuscular junctionInterproscan
GO:0055037
all species →		Cellular Componentrecycling endosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20125FCHSD; F-BAR and double SH3 domains protein-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_008378-T1 global co-expression network
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