Detailed information of OS493_008387-T1 in Lophelia pertusa

Genomic Location: scaffold_19:3166340...3172274
NR annotation: KAJ7393089.1, hypothetical protein OS493_008387 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8K2Y0ORC ubiquitin ligase 1 OS=Mus musculus OX=10090 GN=Obi1 PE=1 SV=2
Q5RD97ORC ubiquitin ligase 1 OS=Pongo abelii OX=9601 GN=OBI1 PE=2 SV=1
Q5W0B1ORC ubiquitin ligase 1 OS=Homo sapiens OX=9606 GN=OBI1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005568 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_008387-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR039209
all species →		FamilyORC ubiquitin ligase 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14609
all species →		RING FINGER PROTEIN 219Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0006275
all species →		Biological Processregulation of DNA replicationInterproscan
GO:0006513
all species →		Biological Processprotein monoubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_008387-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_008387-T1 global co-expression network
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