Gene detail

Detailed information of OS493_008500-T1 in Lophelia pertusa

Genomic Location: scaffold_20:507744...515508
NR annotation: KAJ7386377.1, hypothetical protein OS493_008500 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A2AKQ0	Nucleotide sugar transporter SLC35D1 OS=Mus musculus OX=10090 GN=Slc35d1 PE=2 SV=2
Q5RDC9	Nucleotide sugar transporter SLC35D2 OS=Pongo abelii OX=9601 GN=SLC35D2 PE=2 SV=1
A2VE55	Nucleotide sugar transporter SLC35D2 OS=Bos taurus OX=9913 GN=SLC35D2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005626 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03151 all species →	TPT	Triose-phosphate Transporter family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050186 all species →	Family	Triose Phosphate/Phosphate Translocator	Interproscan
IPR004853 all species →	Domain	Sugar phosphate transporter domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11132 all species →	SOLUTE CARRIER FAMILY 35	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005461 all species →	Molecular Function	UDP-glucuronic acid transmembrane transporter activity	Interproscan
GO:0005462 all species →	Molecular Function	UDP-N-acetylglucosamine transmembrane transporter activity	Interproscan
GO:0005463 all species →	Molecular Function	UDP-N-acetylgalactosamine transmembrane transporter activity	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0015297 all species →	Molecular Function	antiporter activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15281	SLC35D1_2_3; solute carrier family 35, member D1/2/3	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_008500-T1 global co-expression network