Detailed information of OS493_008569-T1 in Lophelia pertusa

Genomic Location: scaffold_20:1338437...1343663
NR annotation: KAJ7386441.1, Spindle assembly abnormal protein 6 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZMV2Spindle assembly abnormal protein 6 homolog OS=Gallus gallus OX=9031 GN=SASS6 PE=2 SV=1
Q7ZVT3Spindle assembly abnormal protein 6 homolog OS=Danio rerio OX=7955 GN=sass6 PE=1 SV=1
Q6NRG6Spindle assembly abnormal protein 6 homolog OS=Xenopus laevis OX=8355 GN=sas6 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004456 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16531
all species →		SAS-6_NCentriolar protein SAS N-terminalDomainInterproscan
PF18594
all species →		Sas6_CCSas6/XLF/XRCC4 coiled-coil domainCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038558
all species →		Homologous_superfamilySAS-6, N-terminal domain superfamilyInterproscan
IPR032396
all species →		DomainSpindle assembly abnormal protein 6, N-terminalInterproscan
IPR041513
all species →		DomainSAS-6 coiled-coil domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44281
all species →		SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005813
all species →		Cellular ComponentcentrosomeInterproscan
GO:0005814
all species →		Cellular ComponentcentrioleInterproscan
GO:0007099
all species →		Biological Processcentriole replicationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_008569-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_008569-T1 global co-expression network
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