Detailed information of OS493_008583-T1 in Lophelia pertusa

Genomic Location: scaffold_20:1509004...1520963
NR annotation: KAJ7386454.1, KN motif and ankyrin repeat domain [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q1LZH7KN motif and ankyrin repeat domain-containing protein 2 OS=Bos taurus OX=9913 GN=KANK2 PE=2 SV=1
E9Q238KN motif and ankyrin repeat domains 1 OS=Mus musculus OX=10090 GN=Kank1 PE=1 SV=1
Q63ZY3KN motif and ankyrin repeat domain-containing protein 2 OS=Homo sapiens OX=9606 GN=KANK2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003574 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12796
all species →		Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00023
all species →		AnkAnkyrin repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110
all species →		RepeatAnkyrin repeatInterproscan
IPR036770
all species →		Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR047184
all species →		FamilyKN motif and ankyrin repeat domain-containing protein 1-4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24168
all species →		KN MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005856
all species →		Cellular ComponentcytoskeletonInterproscan
GO:0030837
all species →		Biological Processnegative regulation of actin filament polymerizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_008583-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_008583-T1 global co-expression network
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