Detailed information of OS493_008941-T1 in Lophelia pertusa

Genomic Location: scaffold_21:1838591...1841612
NR annotation: KAJ7380479.1, hypothetical protein OS493_008941 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2KI24Methenyltetrahydrofolate synthase domain-containing protein OS=Bos taurus OX=9913 GN=MTHFSD PE=2 SV=1
Q3URQ7Methenyltetrahydrofolate synthase domain-containing protein OS=Mus musculus OX=10090 GN=Mthfsd PE=2 SV=1
Q52L34Methenyltetrahydrofolate synthase domain-containing protein OS=Xenopus laevis OX=8355 GN=mthfsd PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010148 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01812
all species →
5-FTHF_cyc-lig5-formyltetrahydrofolate cyclo-ligase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037171
all species →
Homologous_superfamilyNagB/RpiA transferase-likeInterproscan
IPR002698
all species →
Family5-formyltetrahydrofolate cyclo-ligaseInterproscan
IPR024185
all species →
Homologous_superfamily5-formyltetrahydrofolate cyclo-ligase-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13017
all species →
5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01934MTHFS; 5-formyltetrahydrofolate cyclo-ligaseEC:6.3.3.2
One carbon pool by folateko00670deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_008941-T1 global co-expression network
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