Detailed information of OS493_008974-T1 in Lophelia pertusa

Genomic Location: scaffold_21:2266230...2280066
NR annotation: KAJ7380511.1, Neurobeachin-like protein 1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6ZS30Neurobeachin-like protein 1 OS=Homo sapiens OX=9606 GN=NBEAL1 PE=1 SV=3
Q6ZNJ1Neurobeachin-like protein 2 OS=Homo sapiens OX=9606 GN=NBEAL2 PE=1 SV=2
Q6ZQA0Neurobeachin-like protein 2 OS=Mus musculus OX=10090 GN=Nbeal2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002886 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20426
all species →		NBCH_WD40Neurobeachin beta propeller domainRepeatInterproscan
PF02138
all species →		BeachBeige/BEACH domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR046851
all species →		DomainNeurobeachin, beta-propeller domainInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR000409
all species →		DomainBEACH domainInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR050865
all species →		FamilyBEACH Domain-ContainingInterproscan
IPR036372
all species →		Homologous_superfamilyBEACH domain superfamilyInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13743
all species →		BEIGE/BEACH-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0008104
all species →		Biological Processprotein localizationInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0019901
all species →		Molecular Functionprotein kinase bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_008974-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_008974-T1 global co-expression network
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