Detailed information of OS493_009248-T1 in Lophelia pertusa

Genomic Location: scaffold_22:1238960...1249329
NR annotation: KAJ7373923.1, Protein fam49b [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2KJI3CYFIP-related Rac1 interactor B OS=Bos taurus OX=9913 GN=CYRIB PE=2 SV=1
Q9NUQ9CYFIP-related Rac1 interactor B OS=Homo sapiens OX=9606 GN=CYRIB PE=1 SV=1
Q921M7CYFIP-related Rac1 interactor B OS=Mus musculus OX=10090 GN=Cyrib PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005734 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07159
all species →		CYRIA-B_Rac1-bdCYRIA/CYRIB Rac1 binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009828
all species →		DomainCYRIA/CYRIB, Rac1 binding domainInterproscan
IPR039789
all species →		FamilyCYFIP-related Rac1 interactorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12422
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0031267
all species →		Molecular Functionsmall GTPase bindingInterproscan
GO:0030833
all species →		Biological Processregulation of actin filament polymerizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_009248-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_009248-T1 global co-expression network
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