Detailed information of OS493_009451-T1 in Lophelia pertusa

Genomic Location: scaffold_22:3003225...3007471
NR annotation: KAJ7374114.1, hypothetical protein OS493_009451 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P54198Protein HIRA OS=Homo sapiens OX=9606 GN=HIRA PE=1 SV=2
Q8QFR2Protein HIRA OS=Xenopus laevis OX=8355 GN=hira PE=1 SV=2
Q61666Protein HIRA OS=Mus musculus OX=10090 GN=Hira PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004897 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07569
all species →		HiraTUP1-like enhancer of splitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011494
all species →		DomainProtein HIRA-like, C-terminalInterproscan
IPR031120
all species →		FamilyWD repeat HIR1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13831
all species →		MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006338
all species →		Biological Processchromatin remodelingInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000417
all species →		Cellular ComponentHIR complexInterproscan
GO:0000790
all species →		Cellular ComponentchromatinInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006325
all species →		Biological Processchromatin organizationInterproscan
GO:0006336
all species →		Biological Processchromatin organizationInterproscan
GO:0006351
all species →		Biological ProcessDNA-templated transcriptionInterproscan
GO:0031491
all species →		Molecular Functionnucleosome bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_009451-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_009451-T1 global co-expression network
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