Detailed information of OS493_009475-T1 in Lophelia pertusa

Genomic Location: scaffold_22:3242052...3246502
NR annotation: KAJ7374138.1, hypothetical protein OS493_009475 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3U487E3 ubiquitin-protein ligase HECTD3 OS=Mus musculus OX=10090 GN=Hectd3 PE=1 SV=2
Q5T447E3 ubiquitin-protein ligase HECTD3 OS=Homo sapiens OX=9606 GN=HECTD3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001728 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_009475-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR035983
all species →		Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR042469
all species →		FamilyE3 ubiquitin-protein ligase HECTD3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46654
all species →		E3 UBIQUITIN-PROTEIN LIGASE HECTD3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_009475-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_009475-T1 global co-expression network
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