Detailed information of OS493_009503-T1 in Lophelia pertusa

Genomic Location: scaffold_22:3515171...3526469
NR annotation: KAJ7374161.1, Putative Polycomb group protein asxl2 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P59598Polycomb group protein ASXL1 OS=Mus musculus OX=10090 GN=Asxl1 PE=1 SV=1
Q8IXJ9Polycomb group protein ASXL1 OS=Homo sapiens OX=9606 GN=ASXL1 PE=1 SV=4
Q76L83Putative Polycomb group protein ASXL2 OS=Homo sapiens OX=9606 GN=ASXL2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005609 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13919
all species →		ASXHAsx homology domainDomainInterproscan
PF13922
all species →		PHD_3PHD domain of transcriptional enhancer, AsxDomainInterproscan
PF05066
all species →		HARE-HTHHB1, ASXL, restriction endonuclease HTH domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044867
all species →		DomainDEUBAD domainInterproscan
IPR028020
all species →		DomainASX, DEUBAD domainInterproscan
IPR024811
all species →		FamilyPolycomb protein ASX/ASX-likeInterproscan
IPR007759
all species →		DomainASXL, HARE-HTH domainInterproscan
IPR026905
all species →		DomainProtein ASX-like, PHD domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13578
all species →		ADDITIONAL SEX COMBS LIKE PROTEIN ASXLInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003682
all species →		Molecular Functionchromatin bindingInterproscan
GO:0009887
all species →		Biological Processanimal organ morphogenesisInterproscan
GO:0035517
all species →		Cellular ComponentPR-DUB complexInterproscan
GO:0045944
all species →		Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_009503-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_009503-T1 global co-expression network
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