Gene detail

Detailed information of OS493_009601-T1 in Lophelia pertusa

Genomic Location: scaffold_23:645087...651779
NR annotation: KAJ7363447.1, hypothetical protein OS493_009601 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003729 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05292 all species →	MCD	Malonyl-CoA decarboxylase C-terminal domain	Domain	Interproscan
PF17408 all species →	MCD_N	Malonyl-CoA decarboxylase N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007956 all species →	Domain	Malonyl-CoA decarboxylase, C-terminal	Interproscan
IPR038351 all species →	Homologous_superfamily	Malonyl-CoA decarboxylase, N-terminal domain superfamily	Interproscan
IPR042303 all species →	Homologous_superfamily	Malonyl-CoA decarboxylase, C-terminal catalytic domain superfamily	Interproscan
IPR038917 all species →	Family	Malonyl-CoA decarboxylase	Interproscan
IPR035372 all species →	Domain	Malonyl-CoA decarboxylase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28641 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006633 all species →	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0050080 all species →	Molecular Function	malonyl-CoA decarboxylase activity	Interproscan
GO:0005759 all species →	Cellular Component	mitochondrial matrix	Interproscan
GO:0005782 all species →	Cellular Component	peroxisomal matrix	Interproscan
GO:0006085 all species →	Biological Process	acetyl-CoA biosynthetic process	Interproscan
GO:2001294 all species →	Biological Process	malonyl-CoA catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_009601-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_009601-T1 global co-expression network