Gene detail

Detailed information of OS493_009912-T1 in Lophelia pertusa

Genomic Location: scaffold_24:679644...681664
NR annotation: KAJ7337062.1, hypothetical protein OS493_009912 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6P011	ER membrane protein complex subunit 4 OS=Danio rerio OX=7955 GN=emc4 PE=2 SV=1
B5XB24	ER membrane protein complex subunit 4 OS=Salmo salar OX=8030 GN=emc4 PE=2 SV=1
Q6GR43	ER membrane protein complex subunit 4 OS=Xenopus laevis OX=8355 GN=emc4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007516 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06417 all species →	DUF1077	Protein of unknown function (DUF1077)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009445 all species →	Family	TMEM85/ER membrane protein complex subunit 4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19315 all species →	ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0034975 all species →	Biological Process	protein folding in endoplasmic reticulum	Interproscan
GO:0072546 all species →	Cellular Component	EMC complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23565	EMC4, TMEM85; ER membrane protein complex subunit 4	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_009912-T1 global co-expression network