Detailed information of OS493_010167-T1 in Lophelia pertusa

Genomic Location: scaffold_24:3467071...3478780
NR annotation: KAJ7337307.1, 39S ribosomal protein L38, mitochondrial [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5PQN9Large ribosomal subunit protein mL38 OS=Rattus norvegicus OX=10116 GN=Mrpl38 PE=2 SV=2
Q3ZBF3Large ribosomal subunit protein mL38 OS=Bos taurus OX=9913 GN=MRPL38 PE=1 SV=2
Q8K2M0Large ribosomal subunit protein mL38 OS=Mus musculus OX=10090 GN=Mrpl38 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006715 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01161
all species →		PBPPhosphatidylethanolamine-binding proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008914
all species →		FamilyPhosphatidylethanolamine-binding proteinInterproscan
IPR035810
all species →		FamilyPhosphatidylethanolamine-binding protein, eukaryoticInterproscan
IPR036610
all species →		Homologous_superfamilyPEBP-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11362
all species →		PHOSPHATIDYLETHANOLAMINE-BINDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005762
all species →		Cellular Componentmitochondrial large ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_010167-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_010167-T1 global co-expression network
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