Detailed information of OS493_010247-T1 in Lophelia pertusa

Genomic Location: scaffold_25:302583...306158
NR annotation: KAJ7392596.1, hypothetical protein OS493_010247 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P05083Argininosuccinate lyase OS=Gallus gallus OX=9031 GN=ASL2 PE=2 SV=1
P24058Argininosuccinate lyase OS=Anas platyrhynchos OX=8839 GN=ASL2 PE=1 SV=4
P20673Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002688 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00206
all species →		Lyase_1LyaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024083
all species →		Homologous_superfamilyFumarase/histidase, N-terminalInterproscan
IPR008948
all species →		Homologous_superfamilyL-Aspartase-likeInterproscan
IPR022761
all species →		DomainFumarate lyase, N-terminalInterproscan
IPR009049
all species →		FamilyArgininosuccinate lyaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43814
all species →		ARGININOSUCCINATE LYASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0004056
all species →		Molecular Functionargininosuccinate lyase activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0042450
all species →		Biological Processarginine biosynthetic process via ornithineInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_010247-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_010247-T1 global co-expression network
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