Detailed information of OS493_010248-T1 in Lophelia pertusa

Genomic Location: scaffold_25:307258...313432
NR annotation: KAJ7392597.1, hypothetical protein OS493_010248 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q60HH3Argininosuccinate lyase OS=Macaca fascicularis OX=9541 GN=ASL PE=2 SV=1
P51464Argininosuccinate lyase OS=Aquarana catesbeiana OX=8400 GN=ASL PE=3 SV=1
Q91YI0Argininosuccinate lyase OS=Mus musculus OX=10090 GN=Asl PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002688 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00206
all species →		Lyase_1LyaseDomainInterproscan
PF14698
all species →		ASL_C2Argininosuccinate lyase C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000362
all species →		FamilyFumarate lyase familyInterproscan
IPR008948
all species →		Homologous_superfamilyL-Aspartase-likeInterproscan
IPR009049
all species →		FamilyArgininosuccinate lyaseInterproscan
IPR022761
all species →		DomainFumarate lyase, N-terminalInterproscan
IPR029419
all species →		DomainArgininosuccinate lyase, C-terminalInterproscan
IPR020557
all species →		Conserved_siteFumarate lyase, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43814
all species →		ARGININOSUCCINATE LYASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0004056
all species →		Molecular Functionargininosuccinate lyase activityInterproscan
GO:0042450
all species →		Biological Processarginine biosynthetic process via ornithineInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_010248-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_010248-T1 global co-expression network
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