Detailed information of OS493_010287-T1 in Lophelia pertusa

Genomic Location: scaffold_25:751746...753934
NR annotation: KAJ7392636.1, Clathrin heavy chain linker domain-containing protein 1 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5M6W3Clathrin heavy chain linker domain-containing protein 1 OS=Mus musculus OX=10090 GN=Clhc1 PE=2 SV=1
P34574Probable clathrin heavy chain 1 OS=Caenorhabditis elegans OX=6239 GN=chc-1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002343 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15739
all species →		TSNAXIP1_NTranslin-associated factor X-interacting N-terminusFamilyInterproscan
PF13838
all species →		Clathrin_H_linkClathrin-H-linkRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032755
all species →		DomainTranslin-associated factor X-interacting protein 1, N-terminalInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR012331
all species →		Homologous_superfamilyClathrin, heavy chain, linkerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10292
all species →		CLATHRIN HEAVY CHAIN RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_010287-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_010287-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_010287-T1 global co-expression network
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