Detailed information of OS493_010367-T1 in Lophelia pertusa

Genomic Location: scaffold_25:1439386...1440219
NR annotation: KAJ7392714.1, Lathosterol oxidase [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O75845Lathosterol oxidase OS=Homo sapiens OX=9606 GN=SC5D PE=1 SV=2
Q9EQS5Lathosterol oxidase OS=Rattus norvegicus OX=10116 GN=Sc5d PE=1 SV=1
O88822Lathosterol oxidase OS=Mus musculus OX=10090 GN=Sc5d PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010371 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04116
all species →		FA_hydroxylaseFatty acid hydroxylaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006694
all species →		DomainFatty acid hydroxylaseInterproscan
IPR050307
all species →		FamilySterol Desaturase and Related EnzymesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11863
all species →		STEROL DESATURASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005506
all species →		Molecular Functioniron ion bindingInterproscan
GO:0008610
all species →		Biological Processlipid biosynthetic processInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0000248
all species →		Molecular FunctionC-5 sterol desaturase activityInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0016126
all species →		Biological Processsterol biosynthetic processInterproscan
GO:0033490
all species →		Biological Processcholesterol biosynthetic process via lathosterolInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00227SC5DL, ERG3; Delta7-sterol 5-desaturaseEC:1.14.19.20
Steroid biosynthesisko00100deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_010367-T1 global co-expression network
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