Detailed information of OS493_010458-T1 in Lophelia pertusa

Genomic Location: scaffold_25:2219195...2220774
NR annotation: KAJ7392799.1, Protein T2 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004249 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21243
all species →		ECT2_BRCT0ECT2, BRCT0 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036420
all species →		Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR049396
all species →		DomainECT2, BRCT0 domainInterproscan
IPR026817
all species →		FamilyGuanine nucleotide exchange factor Ect2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16777
all species →		PROTEIN ECT2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000281
all species →		Biological Processmitotic cytokinesisInterproscan
GO:0005085
all species →		Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005096
all species →		Molecular FunctionGTPase activator activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005938
all species →		Cellular Componentcell cortexInterproscan
GO:0007399
all species →		Biological Processnervous system developmentInterproscan
GO:0043547
all species →		Biological Processpositive regulation of GTPase activityInterproscan
GO:0090630
all species →		Biological Processactivation of GTPase activityInterproscan
GO:2000431
all species →		Biological Processregulation of cytokinesis, actomyosin contractile ring assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_010458-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_010458-T1 global co-expression network
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