Detailed information of OS493_010464-T1 in Lophelia pertusa

Genomic Location: scaffold_25:2259555...2261538
NR annotation: KAJ7392805.1, Integrator complex subunit 4 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q68F70Integrator complex subunit 4 OS=Xenopus laevis OX=8355 GN=ints4 PE=2 SV=1
Q96HW7Integrator complex subunit 4 OS=Homo sapiens OX=9606 GN=INTS4 PE=1 SV=2
Q8CIM8Integrator complex subunit 4 OS=Mus musculus OX=10090 GN=Ints4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004115 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_010464-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20938
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016180
all species →		Biological ProcesssnRNA processingInterproscan
GO:0032039
all species →		Cellular Componentintegrator complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_010464-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_010464-T1 global co-expression network
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