Detailed information of OS493_010669-T1 in Lophelia pertusa

Genomic Location: scaffold_26:2052611...2075586
NR annotation: KAJ7386265.1, Tissue alpha-L-fucosidase [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
C3YWU0Alpha-L-fucosidase OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_56888 PE=3 SV=2
Q6AYS4Plasma alpha-L-fucosidase OS=Rattus norvegicus OX=10116 GN=Fuca2 PE=2 SV=1
Q99KR8Plasma alpha-L-fucosidase OS=Mus musculus OX=10090 GN=Fuca2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000718 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01120
all species →		Alpha_L_fucosAlpha-L-fucosidaseDomainInterproscan
PF16757
all species →		Fucosidase_CAlpha-L-fucosidase C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013780
all species →		Homologous_superfamilyGlycosyl hydrolase, all-betaInterproscan
IPR017853
all species →		Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR000933
all species →		FamilyGlycoside hydrolase, family 29Interproscan
IPR031919
all species →		DomainAlpha-L-fucosidase, C-terminalInterproscan
IPR016286
all species →		FamilyAlpha-L-fucosidase, metazoa-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10030
all species →		ALPHA-L-FUCOSIDASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004560
all species →		Molecular Functionalpha-L-fucosidase activityInterproscan
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan
GO:0005764
all species →		Cellular ComponentlysosomeInterproscan
GO:0006004
all species →		Biological Processfucose metabolic processInterproscan
GO:0016139
all species →		Biological Processglycoside catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_010669-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_010669-T1 global co-expression network
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