Detailed information of OS493_010763-T1 in Lophelia pertusa

Genomic Location: scaffold_27:183922...190514
NR annotation: KAJ7380056.1, Ankyrin repeat and zinc finger domain-containing protein 1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q80UU1tRNA endonuclease ANKZF1 OS=Mus musculus OX=10090 GN=Ankzf1 PE=1 SV=2
Q58CQ5tRNA endonuclease ANKZF1 OS=Bos taurus OX=9913 GN=ANKZF1 PE=2 SV=2
Q66H85tRNA endonuclease ANKZF1 OS=Rattus norvegicus OX=10116 GN=Ankzf1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004911 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18826
all species →		bVLRF1Bacteroidetes VLRF1 release factorDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041175
all species →		DomainVLRF1/Vms1Interproscan
IPR047139
all species →		FamilytRNA endonuclease ANKZF1/VMS1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16036
all species →		ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0030433
all species →		Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_010763-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_010763-T1 global co-expression network
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