Detailed information of OS493_010849-T1 in Lophelia pertusa

Genomic Location: scaffold_27:1058781...1061138
NR annotation: KAJ7380138.1, hypothetical protein OS493_010849 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99L133-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Hibadh PE=1 SV=1
P292663-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3
P319373-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=HIBADH PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004016 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03446
all species →		NAD_binding_2NAD binding domain of 6-phosphogluconate dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002204
all species →		Conserved_site3-hydroxyisobutyrate dehydrogenase-related, conserved siteInterproscan
IPR006115
all species →		Domain6-phosphogluconate dehydrogenase, NADP-bindingInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22981
all species →		3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0050661
all species →		Molecular FunctionNADP bindingInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0006574
all species →		Biological Processvaline catabolic processInterproscan
GO:0008442
all species →		Molecular Function3-hydroxyisobutyrate dehydrogenase activityInterproscan
GO:0016616
all species →		Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_010849-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_010849-T1 global co-expression network
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