Detailed information of OS493_011056-T1 in Lophelia pertusa

Genomic Location: scaffold_27:3631977...3639534
NR annotation: KAJ7380333.1, Transcription initiation factor IIA subunit 1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99PM3Transcription initiation factor IIA subunit 1 OS=Mus musculus OX=10090 GN=Gtf2a1 PE=1 SV=2
P52655Transcription initiation factor IIA subunit 1 OS=Homo sapiens OX=9606 GN=GTF2A1 PE=1 SV=1
Q5RCU0Transcription initiation factor IIA subunit 1 OS=Pongo abelii OX=9601 GN=GTF2A1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006416 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03153
all species →		TFIIATranscription factor IIA, alpha/beta subunitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004855
all species →		FamilyTranscription factor IIA, alpha/beta subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12694
all species →		TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005672
all species →		Cellular Componenttranscription factor TFIIA complexInterproscan
GO:0006366
all species →		Biological Processtranscription by RNA polymerase IIInterproscan
GO:0006367
all species →		Biological Processtranscription initiation at RNA polymerase II promoterInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_011056-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_011056-T1 global co-expression network
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