Detailed information of OS493_011154-T1 in Lophelia pertusa

Genomic Location: scaffold_28:941838...962305
NR annotation: KAJ7373552.1, Nucleosome assembly protein 1-like 1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4U0Y4Nucleosome assembly protein 1-like 1-A OS=Xenopus laevis OX=8355 GN=nap1l1-a PE=1 SV=1
Q28EB4Nucleosome assembly protein 1-like 1 OS=Xenopus tropicalis OX=8364 GN=nap1l1 PE=2 SV=1
Q7ZY81Nucleosome assembly protein 1-like 1-B OS=Xenopus laevis OX=8355 GN=nap1l1-b PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004598 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00956
all species →		NAPNucleosome assembly protein (NAP)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037231
all species →		Homologous_superfamilyNAP-like superfamilyInterproscan
IPR002164
all species →		FamilyNucleosome assembly protein (NAP)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11875
all species →		TESTIS-SPECIFIC Y-ENCODED PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000785
all species →		Cellular ComponentchromatinInterproscan
GO:0003682
all species →		Molecular Functionchromatin bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006334
all species →		Biological Processnucleosome assemblyInterproscan
GO:0042393
all species →		Molecular Functionhistone bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_011154-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_011154-T1 global co-expression network
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