Detailed information of OS493_011566-T1 in Lophelia pertusa

Genomic Location: scaffold_29:2581548...2585102
NR annotation: KAJ7363283.1, spermatogenesis associated protein 5 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O28972Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) OX=224325 GN=AF_1297 PE=3 SV=1
Q8NB90ATPase family gene 2 protein homolog A OS=Homo sapiens OX=9606 GN=AFG2A PE=1 SV=3
Q9HPF0Protein CdcH OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) OX=64091 GN=cdcH PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000746 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_011566-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR045199
all species →		FamilyATPase family AAA domain-containing protein ATAD2-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23069
all species →		AAA DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003682
all species →		Molecular Functionchromatin bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan
GO:0042393
all species →		Molecular Functionhistone bindingInterproscan
GO:0045944
all species →		Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_011566-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_011566-T1 global co-expression network
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