Detailed information of OS493_011670-T1 in Lophelia pertusa

Genomic Location: scaffold_29:3429400...3433863
NR annotation: KAJ7363382.1, hypothetical protein OS493_011670 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5SUR0Phosphoribosylformylglycinamidine synthase OS=Mus musculus OX=10090 GN=Pfas PE=1 SV=1
O15067Phosphoribosylformylglycinamidine synthase OS=Homo sapiens OX=9606 GN=PFAS PE=1 SV=4
Q9M8D3Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g74260 PE=2 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004535 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02769
all species →		AIRS_CAIR synthase related protein, C-terminal domainDomainInterproscan
PF13507
all species →		GATase_5CobB/CobQ-like glutamine amidotransferase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029062
all species →		Homologous_superfamilyClass I glutamine amidotransferase-likeInterproscan
IPR010918
all species →		DomainPurM-like, C-terminal domainInterproscan
IPR036921
all species →		Homologous_superfamilyPurM-like, N-terminal domain superfamilyInterproscan
IPR036676
all species →		Homologous_superfamilyPurM-like, C-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10099
all species →		PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASEInterproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_011670-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_011670-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_011670-T1 global co-expression network
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