Detailed information of OS493_011685-T1 in Lophelia pertusa

Genomic Location: scaffold_30:155618...160610
NR annotation: KAJ7336484.1, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q68FX0Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3B PE=2 SV=1
O43837Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Homo sapiens OX=9606 GN=IDH3B PE=1 SV=2
Q28479Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Macaca fascicularis OX=9541 GN=IDH3B PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001155 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00180
all species →		Iso_dhIsocitrate/isopropylmalate dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024084
all species →		DomainIsopropylmalate dehydrogenase-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11835
all species →		DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0006099
all species →		Biological Processtricarboxylic acid cycleInterproscan
GO:0006102
all species →		Biological Processisocitrate metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_011685-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_011685-T1 global co-expression network
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