Detailed information of OS493_011941-T1 in Lophelia pertusa

Genomic Location: scaffold_30:3442591...3443453
NR annotation: KAJ7336719.1, Golgi Transport [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P00504Aspartate aminotransferase, cytoplasmic OS=Gallus gallus OX=9031 GN=GOT1 PE=1 SV=3
P00503Aspartate aminotransferase, cytoplasmic OS=Sus scrofa OX=9823 GN=GOT1 PE=1 SV=3
P33097Aspartate aminotransferase, cytoplasmic OS=Bos taurus OX=9913 GN=GOT1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001598 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00155
all species →		Aminotran_1_2Aminotransferase class I and IIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015422
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR000796
all species →		FamilyAspartate/other aminotransferaseInterproscan
IPR015424
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR004839
all species →		DomainAminotransferase, class I/classIIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11879
all species →		ASPARTATE AMINOTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004069
all species →		Molecular FunctionL-aspartate:2-oxoglutarate aminotransferase activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006520
all species →		Biological Processamino acid metabolic processInterproscan
GO:0006532
all species →		Biological Processaspartate biosynthetic processInterproscan
GO:0008483
all species →		Molecular Functiontransaminase activityInterproscan
GO:0009058
all species →		Biological Processbiosynthetic processInterproscan
GO:0030170
all species →		Molecular Functionpyridoxal phosphate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_011941-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_011941-T1 global co-expression network
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