Detailed information of OS493_012083-T1 in Lophelia pertusa

Genomic Location: scaffold_31:1612042...1613483
NR annotation: KAJ7392420.1, nucleotide exchange factor sil1 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6NUA7Nucleotide exchange factor SIL1 OS=Xenopus laevis OX=8355 GN=sil1 PE=2 SV=1
Q32KV6Nucleotide exchange factor SIL1 OS=Bos taurus OX=9913 GN=SIL1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007461 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_012083-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR050693
all species →		FamilyHsp70 Nucleotide Exchange Factors and InhibitorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19316
all species →		PROTEIN FOLDING REGULATORInterproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_012083-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_012083-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_012083-T1 global co-expression network
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