Gene detail

Detailed information of OS493_012186-T1 in Lophelia pertusa

Genomic Location: scaffold_31:2920017...2929590
NR annotation: KAJ7392515.1, Meningioma expressed antigen 5 (hyaluronidase) [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

OS493_012186-T1

ATGTCCAAGCTTTCTTTTTTGTCCAACAGAATACTGTGGCACTCGAGCTGTTCCAACTGTAGAGACATCAGACTACCTCATTACTTTGGGAATAAACTTAACCCGAAGATAAACATTATGTGGACAGGACCAAAGGTAGTCTCCAAAGTGATTACCACACAAACTATTGAGGCCCTAACAAATGTGCTTAAACGGAGACCTGTCATTTGGGACAACATTCATGCAAATGACTATGATCAGCGACGAGTCTTCTTGGGGCCATATGATGGGAGACCAGTTGAGCTTTTCCCCATGCTTAATGGAGTACTAACCAACCCTAACTGTGAGTTTGAAAGTAACTTCATTGCTGTCCACACTCTTGCTTCATGGCTAAGAGATTCCTCACTGATCACTGCAGAGGAACCAATGAGTATTGATCCAAAGGCTGAAAAGTCAAGTATCTCTGGGGAGCCAATGGAGGAAGATCTGCTTGCTAGTACTGAGAGTGATGGAAATGACAATGCCGAGAAAGAAACTGATCAAGGAGATTCTCAAGAAAACAGTTCTAGTGAAACAGACAGTGAAATTGTAAAGGTCGAAGGCGAGATGGAGACAGAGAGTGGTGCGTCATTGAGTGAATCGAAGAGTGTTACTGTTCGCACAATCTACAACCCTCAGAATGCTTTGCGAGAGGCTGTTTCTGCCTGGCTGGAAGAATTTTCTAAAGTGAAGCATGCTACATCCAGAACCTATGCCAAGAGTGGTACCTACTGTATGACCACAGAGGCTATGCCAGTTCAAGTGCAAGCTGCTATGGCAACATATACAACATCAACTACAAGTGCTACTACCTCTGTGTGTTCACCTGTAGTGACTCCTTCACCAATAAAGGTTGCAAAGGAAAACAGCAGGAAAAAGCTTAGCACCTCTTCTTCCCCAGAAAAGAAAGTTGGAGAACTTGTAAAGAAAGAGCAGGAGATGCCTATGGAGATAAGTATACTAAAGGAGAAAGCTGTCTTGTCGCCACTGAGTGTTGAGGACCTTCTGTTGTTGGTAGATTTATTTTATCTACCATACAACCATGGTCAGAAGGCCAAGCAGATCATAGCTGATTTTAAATGGCTCAAGTTCAATGCAATTAAGGAGGATTCACAAGAGTTCATGGAGCTTACTGAACAAGAGCAGAAATCTAAGATAACAGAGTGGACTGACAAAGCTGAGAAGTTCCATGAAATCTGTCGATCAGTTGGAGAGATGTTTGTGAGACTAACTGAGACGTCCAACAGAGCATTACTGTATGATCTCTATCCATATGTGTGGGACGTTAAAGAAGTCTTGCAGTTGCTAGACACATTTGTAAATTGGCTAAGCACAAAGAATAAGAGGAAGAAACAAAAGGGACAAAGCTTTTTCCCAGAAGATCCAGAACCATGGGTGTTTAGAGGAGGTTTATGTGGAGAGCTGCAGAGACTGCTACCTATCGATGGAGGGCATGAAGTGTTCAACTTAAGAGCTCCTGAAATTCCAACAACGTGTATCTACACAATAAGACCATATCAAACAGAAGATGAGAAATCCTTATATGAAATTTGCCTATCAACATGTGATGATTGGAAAGATGGACATGATTTATTTCCTGACAAACATCAGTTCAACATGGCAGGAGACAGGTTTGTAGGTCCATATCTGAAGATCTGTCCTGAACATGTGTTTGTGGTGGAGGATGGTGATGGCATATGCGGTTATGCAGTAGCAACTCCTGATTCAAAACACTTTTATGAGCAGTTTAAGAAGCACTGGCTTCCAGAGGTGTGCAAGAAATACCGAAAGCCAAGAGGAAATTCATCAGAGTGGACGTATGCCGAACAACTCGCCAGTAGCTTTCACAGTCCAAGTATATTTCTCCCCGAAGACTTGTCTTTAAAGTTTAGTGCTCATGTACAGATCTACCTTCTTCCTCTTGCACAGGACCTTGGTATTGGCAAACGGCTGTTAGCCTGCGTTCTCTCAGCACTGAAGGCGGAAGATTGTACGGGCGTGCACTGTGAGATTGCAACCACAAACTACAATGCTCTGGACTTCTACACCAAATTAGGATTCTATAATATTCCTCTTAAGGAGCTAGCGCCGCCGGACACAGTTATCTTCGGCAGAACATTTTAA

Transcript

OS493_012186-T1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9EQQ9	Protein O-GlcNAcase OS=Mus musculus OX=10090 GN=Oga PE=1 SV=2
O60502	Protein O-GlcNAcase OS=Homo sapiens OX=9606 GN=OGA PE=1 SV=2
Q8VIJ5	Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002608 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07555 all species →	NAGidase	beta-N-acetylglucosaminidase	Family	Interproscan
PF00583 all species →	Acetyltransf_1	Acetyltransferase (GNAT) family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000182 all species →	Domain	GNAT domain	Interproscan
IPR016181 all species →	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan
IPR051822 all species →	Family	Glycosyl Hydrolase Family 84	Interproscan
IPR011496 all species →	Domain	Beta-N-acetylglucosaminidase, catalytic domain	Interproscan
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13170 all species →	O-GLCNACASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016747 all species →	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_012186-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_012186-T1 global co-expression network