Detailed information of OS493_012525-T1 in Lophelia pertusa

Genomic Location: scaffold_33:178981...180308
NR annotation: KAJ7379779.1, hypothetical protein OS493_012525 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9M0X94-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana OX=3702 GN=4CLL7 PE=1 SV=1
Q8GVF9Putative 4-coumarate--CoA ligase-like 8 OS=Oryza sativa subsp. japonica OX=39947 GN=4CLL8 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000834 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00501
all species →		AMP-bindingAMP-binding enzymeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000873
all species →		DomainAMP-dependent synthetase/ligase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24096
all species →		LONG-CHAIN-FATTY-ACID--COA LIGASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016405
all species →		Molecular FunctionCoA-ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_012525-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_012525-T1 global co-expression network
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