Detailed information of OS493_012721-T1 in Lophelia pertusa

Genomic Location: scaffold_33:2391820...2396485
NR annotation: KAJ7379959.1, Rab3 GTPase-activating protein non-catalytic subunit [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9H2M9Rab3 GTPase-activating protein non-catalytic subunit OS=Homo sapiens OX=9606 GN=RAB3GAP2 PE=1 SV=1
Q5U1Z0Rab3 GTPase-activating protein non-catalytic subunit OS=Rattus norvegicus OX=10116 GN=Rab3gap2 PE=1 SV=2
Q8BMG7Rab3 GTPase-activating protein non-catalytic subunit OS=Mus musculus OX=10090 GN=Rab3gap2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003292 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14655
all species →		RAB3GAP2_NRab3 GTPase-activating protein regulatory subunit N-terminusRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032839
all species →		DomainRab3-GAP regulatory subunit, N-terminalInterproscan
IPR026059
all species →		FamilyRab3GAP regulatory subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12472
all species →		RAB3-GAP REGULATORY DOMAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0043087
all species →		Biological Processregulation of GTPase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_012721-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_012721-T1 global co-expression network
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