Detailed information of OS493_013082-T1 in Lophelia pertusa

Genomic Location: scaffold_35:196885...217635
NR annotation: KAJ7361996.1, DNA-directed RNA polymerase III subunit RPC5 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9CZT4DNA-directed RNA polymerase III subunit RPC5 OS=Mus musculus OX=10090 GN=Polr3e PE=1 SV=2
Q9NVU0DNA-directed RNA polymerase III subunit RPC5 OS=Homo sapiens OX=9606 GN=POLR3E PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003468 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04801
all species →		RPC5RPC5 proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006886
all species →		FamilyDNA-directed RNA polymerase III subunit Rpc5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12069
all species →		DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005666
all species →		Cellular ComponentRNA polymerase III complexInterproscan
GO:0006351
all species →		Biological ProcessDNA-templated transcriptionInterproscan
GO:0042797
all species →		Biological ProcesstRNA transcription by RNA polymerase IIIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14721RPC5, POLR3E; DNA-directed RNA polymerase III subunit RPC5-Transcription machineryko03021deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_013082-T1 global co-expression network
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