Detailed information of OS493_013091-T1 in Lophelia pertusa

Genomic Location: scaffold_35:302999...308807
NR annotation: KAJ7362005.1, Nucleoporin nup85 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6DBY0Nuclear pore complex protein Nup85 OS=Danio rerio OX=7955 GN=nup85 PE=2 SV=1
Q6DK84Nuclear pore complex protein Nup85 OS=Xenopus tropicalis OX=8364 GN=nup85 PE=2 SV=1
Q68FJ0Nuclear pore complex protein Nup85 OS=Xenopus laevis OX=8355 GN=nup85 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003358 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07575
all species →		Nucleopor_Nup85Nup85 NucleoporinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011502
all species →		FamilyNucleoporin Nup85-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13373
all species →		FROUNT PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006406
all species →		Biological ProcessmRNA export from nucleusInterproscan
GO:0006606
all species →		Biological Processprotein import into nucleusInterproscan
GO:0017056
all species →		Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0031080
all species →		Cellular Componentnuclear pore outer ringInterproscan
GO:0045893
all species →		Biological Processpositive regulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_013091-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_013091-T1 global co-expression network
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