Gene detail

Detailed information of OS493_013147-T1 in Lophelia pertusa

Genomic Location: scaffold_35:646655...647281
NR annotation: KAJ7362058.1, PITH domain-containing protein 1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9VK68	PITH domain-containing protein CG6153 OS=Drosophila melanogaster OX=7227 GN=CG6153 PE=2 SV=1
Q29L80	PITH domain-containing protein GA19395 OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA19395 PE=3 SV=1
Q6NYX8	PITH domain-containing protein 1 OS=Danio rerio OX=7955 GN=pithd1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009613 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06201 all species →	PITH	PITH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045099 all species →	Family	PITH domain-containing protein 1-like	Interproscan
IPR010400 all species →	Domain	PITH domain	Interproscan
IPR037047 all species →	Homologous_superfamily	PITH domain superfamily	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12175 all species →	AD039 HT014 THIOREDOXIN FAMILY TRP26	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_013147-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_013147-T1 global co-expression network