Detailed information of OS493_013217-T1 in Lophelia pertusa

Genomic Location: scaffold_35:1316858...1322184
NR annotation: KAJ7362126.1, hypothetical protein OS493_013217 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P21265Adenylosuccinate lyase OS=Gallus gallus OX=9031 GN=ADSL PE=2 SV=2
A3KN12Adenylosuccinate lyase OS=Bos taurus OX=9913 GN=ADSL PE=2 SV=1
P30566Adenylosuccinate lyase OS=Homo sapiens OX=9606 GN=ADSL PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003303 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00206
all species →		Lyase_1LyaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022761
all species →		DomainFumarate lyase, N-terminalInterproscan
IPR000362
all species →		FamilyFumarate lyase familyInterproscan
IPR024083
all species →		Homologous_superfamilyFumarase/histidase, N-terminalInterproscan
IPR008948
all species →		Homologous_superfamilyL-Aspartase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43172
all species →		ADENYLOSUCCINATE LYASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004018
all species →		Molecular FunctionN6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0044208
all species →		Biological Process'de novo' AMP biosynthetic processInterproscan
GO:0070626
all species →		Molecular Function(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activityInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_013217-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_013217-T1 global co-expression network
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