Detailed information of OS493_013257-T1 in Lophelia pertusa

Genomic Location: scaffold_35:1869290...1884424
NR annotation: KAJ7362164.1, hypothetical protein OS493_013257 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8HY02CD209 antigen OS=Symphalangus syndactylus OX=9590 GN=CD209 PE=3 SV=1
Q8HY04CD209 antigen OS=Papio hamadryas OX=9557 GN=CD209 PE=3 SV=1
P60883CD209 antigen OS=Chlorocebus aethiops OX=9534 GN=CD209 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000073 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059
all species →		Lectin_CLectin C-type domainDomainInterproscan
PF07648
all species →		Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan
PF09458
all species →		H_lectinH-type lectin domainDomainInterproscan
PF07645
all species →		EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR001304
all species →		DomainC-type lectin-likeInterproscan
IPR018378
all species →		Conserved_siteC-type lectin, conserved siteInterproscan
IPR037221
all species →		Homologous_superfamilyH-type lectin domain superfamilyInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR002350
all species →		DomainKazal domainInterproscan
IPR019019
all species →		DomainH-type lectin domainInterproscan
IPR050801
all species →		FamilyCalcium-Dependent Lectins in Immunity and DevelopmentInterproscan
IPR049883
all species →		DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22801
all species →		LITHOSTATHINEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0007155
all species →		Biological Processcell adhesionInterproscan
GO:0030246
all species →		Molecular Functioncarbohydrate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_013257-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_013257-T1 global co-expression network
TOP