Detailed information of OS493_013317-T1 in Lophelia pertusa

Genomic Location: scaffold_36:89496...94111
NR annotation: KAJ7335954.1, Tdrd1p [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q940J8Pectin acetylesterase 7 OS=Arabidopsis thaliana OX=3702 GN=PAE7 PE=2 SV=1
Q84JS1Pectin acetylesterase 6 OS=Arabidopsis thaliana OX=3702 GN=PAE6 PE=2 SV=1
Q9SR23Pectin acetylesterase 4 OS=Arabidopsis thaliana OX=3702 GN=PAE4 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002776 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03283
all species →		PAEPectinacetylesteraseFamilyInterproscan
PF00567
all species →		TUDORTudor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035437
all species →		Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan
IPR004963
all species →		FamilyPectinacetylesterase/NOTUMInterproscan
IPR002999
all species →		DomainTudor domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21562
all species →		NOTUM-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016787
all species →		Molecular Functionhydrolase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_013317-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_013317-T1 global co-expression network
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