Detailed information of OS493_013404-T1 in Lophelia pertusa

Genomic Location: scaffold_36:1887739...1892755
NR annotation: KAJ7336030.1, hypothetical protein OS493_013404 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P55091Chymotrypsin-C OS=Rattus norvegicus OX=10116 GN=Ctrc PE=1 SV=1
P08217Chymotrypsin-like elastase family member 2A OS=Homo sapiens OX=9606 GN=CELA2A PE=1 SV=1
P00774Chymotrypsin-like elastase family member 2A OS=Rattus norvegicus OX=10116 GN=Cela2a PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000097 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00089
all species →		TrypsinTrypsinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050850
all species →		FamilyPeptidase S1 family, Elastase subfamilyInterproscan
IPR001314
all species →		FamilyPeptidase S1A, chymotrypsin familyInterproscan
IPR001254
all species →		DomainSerine proteases, trypsin domainInterproscan
IPR043504
all species →		Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR018114
all species →		Active_siteSerine proteases, trypsin family, histidine active siteInterproscan
IPR009003
all species →		Homologous_superfamilyPeptidase S1, PA clanInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24257
all species →		CHYMOTRYPSIN-LIKE ELASTASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004252
all species →		Molecular Functionserine-type endopeptidase activityInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_013404-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_013404-T1 global co-expression network
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