Detailed information of OS493_013446-T1 in Lophelia pertusa

Genomic Location: scaffold_36:2843682...2850141
NR annotation: KAJ7336068.1, Ubiquitin carboxyl-terminal hydrolase bap1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
C4A0D9Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Branchiostoma floridae OX=7739 GN=BAP1 PE=3 SV=1
Q52L14Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Xenopus laevis OX=8355 GN=bap1 PE=2 SV=2
A1L2G3Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Danio rerio OX=7955 GN=bap1 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004546 (this species only)
Ubiquitin familyDUB|UCH|UCH · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18031
all species →		UCH_CUbiquitin carboxyl-terminal hydrolasesDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041507
all species →		DomainPeptidase C12, C-terminal domainInterproscan

 PANTHER
No PANTHER signature was detected for OS493_013446-T1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
No Gene Ontology signature was detected for OS493_013446-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_013446-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_013446-T1 global co-expression network
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