Detailed information of OS493_013722-T1 in Lophelia pertusa

Genomic Location: scaffold_38:459628...473504
NR annotation: KAJ7385694.1, hypothetical protein OS493_013722 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7TXL8Phenolphthiocerol/phthiocerol polyketide synthase subunit C OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=ppsC PE=1 SV=1
P96202Phenolphthiocerol/phthiocerol polyketide synthase subunit C OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=ppsC PE=1 SV=2
Q02251Mycocerosic acid synthase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=mas PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000656 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08659
all species →		KRKR domainFamilyInterproscan
PF00975
all species →		ThioesteraseThioesterase domainDomainInterproscan
PF21089
all species →		PKS_DH_NPolyketide synthase dehydratase domainDomainInterproscan
PF14765
all species →		PS-DHPolyketide synthase dehydratase N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020807
all species →		DomainPolyketide synthase, dehydratase domainInterproscan
IPR013968
all species →		DomainPolyketide synthase, ketoreductase domainInterproscan
IPR050091
all species →		FamilyPolyketide and Nonribosomal Peptide Biosynthesis EnzymesInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR009081
all species →		DomainPhosphopantetheine binding ACP domainInterproscan
IPR001227
all species →		Homologous_superfamilyAcyl transferase domain superfamilyInterproscan
IPR049900
all species →		DomainPolyketide/metazoan fatty acid synthase, dehydratase domainInterproscan
IPR042104
all species →		Homologous_superfamilyPolyketide synthase, dehydratase domain superfamilyInterproscan
IPR001031
all species →		DomainThioesteraseInterproscan
IPR029058
all species →		Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR049552
all species →		DomainPolyketide synthase, dehydratase domain, N-terminalInterproscan
IPR016035
all species →		Homologous_superfamilyAcyl transferase/acyl hydrolase/lysophospholipaseInterproscan
IPR049551
all species →		DomainPolyketide synthase, dehydratase domain, C-terminalInterproscan
IPR036736
all species →		Homologous_superfamilyACP-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43775
all species →		FATTY ACID SYNTHASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004312
all species →		Molecular Functionfatty acid synthase activityInterproscan
GO:0006633
all species →		Biological Processfatty acid biosynthetic processInterproscan
GO:0016740
all species →		Molecular Functiontransferase activityInterproscan
GO:0009058
all species →		Biological Processbiosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_013722-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_013722-T1 global co-expression network
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