Detailed information of OS493_013836-T1 in Lophelia pertusa

Genomic Location: scaffold_38:1816144...1822313
NR annotation: KAJ7385802.1, Lebercilin [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q86VQ0Lebercilin OS=Homo sapiens OX=9606 GN=LCA5 PE=1 SV=2
Q5U2Y9Lebercilin OS=Rattus norvegicus OX=10116 GN=Lca5 PE=2 SV=1
Q80ST9Lebercilin OS=Mus musculus OX=10090 GN=Lca5 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003422 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15619
all species →		LebercilinCiliary protein causing Leber congenital amaurosis diseaseCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028933
all species →		DomainLebercilin domainInterproscan
IPR026188
all species →		FamilyLebercilin-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16650
all species →		C21ORF13-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005930
all species →		Cellular ComponentaxonemeInterproscan
GO:0042073
all species →		Biological Processintraciliary transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_013836-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_013836-T1 global co-expression network
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