Detailed information of OS493_013893-T1 in Lophelia pertusa

Genomic Location: scaffold_38:2244247...2250093
NR annotation: KAJ7385857.1, mitochondrial 54S ribosomal protein YmL19 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P49406Large ribosomal subunit protein bL19m OS=Homo sapiens OX=9606 GN=MRPL19 PE=1 SV=2
Q9D338Large ribosomal subunit protein bL19m OS=Mus musculus OX=10090 GN=Mrpl19 PE=1 SV=1
Q5R8M4Large ribosomal subunit protein bL19m OS=Pongo abelii OX=9601 GN=MRPL19 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008680 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01245
all species →		Ribosomal_L19Ribosomal protein L19FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008991
all species →		Homologous_superfamilyTranslation protein SH3-like domain superfamilyInterproscan
IPR038657
all species →		Homologous_superfamilyLarge ribosomal subunit protein bL19 superfamilyInterproscan
IPR001857
all species →		FamilyLarge ribosomal subunit protein bL19Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15680
all species →		RIBOSOMAL PROTEIN L19Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0005762
all species →		Cellular Componentmitochondrial large ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_013893-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_013893-T1 global co-expression network
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