Detailed information of OS493_013979-T1 in Lophelia pertusa

Genomic Location: scaffold_39:357510...362884
NR annotation: KAJ7379584.1, hypothetical protein OS493_013979 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5F464Lipoma-preferred partner homolog OS=Gallus gallus OX=9031 GN=LPP PE=2 SV=1
Q5XI07Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1
Q8BFW7Lipoma-preferred partner homolog OS=Mus musculus OX=10090 GN=Lpp PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002717 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00412
all species →
LIMLIM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001781
all species →
DomainZinc finger, LIM-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24207
all species →
ZYX102 PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_013979-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_013979-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_013979-T1 global co-expression network
TOP