Detailed information of OS493_013999-T1 in Lophelia pertusa

Genomic Location: scaffold_39:573226...573795
NR annotation: KAJ7379604.1, hypothetical protein OS493_013999 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6GL04Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis OX=8364 GN=vcp PE=2 SV=1
P55072Transitional endoplasmic reticulum ATPase OS=Homo sapiens OX=9606 GN=VCP PE=1 SV=4
Q01853Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000746 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02359
all species →		CDC48_NCell division protein 48 (CDC48), N-terminal domainDomainInterproscan
PF02933
all species →		CDC48_2Cell division protein 48 (CDC48), domain 2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003338
all species →		DomainCDC48, N-terminal subdomainInterproscan
IPR004201
all species →		DomainCDC48, domain 2Interproscan
IPR029067
all species →		Homologous_superfamilyCDC48 domain 2-like superfamilyInterproscan
IPR009010
all species →		Homologous_superfamilyAspartate decarboxylase-like domain superfamilyInterproscan

 PANTHER
No PANTHER signature was detected for OS493_013999-T1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
No Gene Ontology signature was detected for OS493_013999-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_013999-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_013999-T1 global co-expression network
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