Detailed information of OS493_014176-T1 in Lophelia pertusa

Genomic Location: scaffold_40:106520...116390
NR annotation: KAJ7373035.1, Transcription factor Iwr1, partial [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A2BDB7Probable RNA polymerase II nuclear localization protein SLC7A6OS OS=Xenopus laevis OX=8355 GN=slc7a6os PE=2 SV=1
Q28GL6Probable RNA polymerase II nuclear localization protein SLC7A6OS OS=Xenopus tropicalis OX=8364 GN=slc7a6os PE=2 SV=1
Q5U3I2Probable RNA polymerase II nuclear localization protein SLC7A6OS OS=Danio rerio OX=7955 GN=slc7a6os PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006696 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08574
all species →		Iwr1Transcription factor Iwr1 FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013883
all species →		DomainTranscription factor Iwr1 domainInterproscan
IPR040218
all species →		FamilyProbable RNA polymerase II nuclear localization protein SLC7A6OSInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31196
all species →		RNA POLYMERASE II NUCLEAR LOCALIZATION PROTEIN SLC7A6OS-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0032502
all species →		Biological Processdevelopmental processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_014176-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_014176-T1 global co-expression network
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